rs33757359 SNP Detail

Summary

• ID
  rs33757359
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45175672 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGC TCCTCCGACC ACTCTGCCTT
  R
  TTAATTCGGG ATTCCAAGCG GGGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46315890	mCV24323161	ABI	CRAMUS_MOUSE	f	SNP	A	G					G	G
ss61388320	NES16764934	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G	G		G	G		G	A	A
ss136408174	ENSMUSSNP1289986	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss322942721	CHEV_9_45072457	CHEVERUD	SCREENING_POP	f	SNP										A				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs33757359					SNP	A	G	G	G	G	G	G	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61388320	NES16764934	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45175672 () rs orientation: forward

Symbol	Name	Function Class
Il10ra	interleukin 10 receptor, alpha	within coordinates
Tssr84758	transcription start site region 84758	508 bp upstream
Tssr89253	transcription start site region 89253	1435 bp upstream
Tssr89254	transcription start site region 89254	1366 bp upstream
Tssr89255	transcription start site region 89255	1306 bp upstream
Tssr89256	transcription start site region 89256	1275 bp upstream
Tssr89257	transcription start site region 89257	184 bp upstream
Tssr89258	transcription start site region 89258	140 bp upstream
Tssr89259	transcription start site region 89259	123 bp upstream