rs33761533 SNP Detail

Summary

• ID
  rs33761533
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107179528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTCTTCT TCATTTTAAC
  TTGATTGCCA TCTATAAAGG CCCTGTCTGC AAACATGCCC ACAATCTAAG GCACTTGATT
  TTGGATCCTC ACATGCGAAT ATGGGGGGAG ATTAACATTT AACTTAAAAC AGTGACTCCC
  TCTGAAGCAG ATTTAACTAC AGTTCAATAG CATCTGGCAG CATGCTAGAG ATGCTTGGAA
  Y
  ATCGAATTCC ATGTCAAAAA GAGGTTTATG TTGTAAAGTA GACACCTCTC CTCTCTGGAC
  CTCATATGTC ATATCGAGAG TAAGAGGTGT GCACTGGGTC TCCACCACCT CTGCACCTGA
  ATTCCAGGAC CGTGTTCTAG GCAGAGTCGG GCAGTATACA GGGGAGAGTA ACAATTAGAC
  TCCACCACTT TCAAGCAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss46853811	NES10719423	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs33761533					SNP	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46853811	NES10719423	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107179528 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	1557 bp proximal
Rr582952	regulatory region 582952	1811 bp proximal