rs33762286 SNP Detail

Summary

• ID
  rs33762286
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107179604 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATTTTGGAT CCTCACATGC
  GAATATGGGG GGAGATTAAC ATTTAACTTA AAACAGTGAC TCCCTCTGAA GCAGATTTAA
  CTACAGTTCA ATAGCATCTG GCAGCATGCT AGAGATGCTT GGAATATCGA ATTCCATGTC
  AAAAAGAGGT TTATGTTGTA AAGTAGACAC CTCTCCTCTC TGGACCTCAT ATGTCATATC
  R
  AGAGTAAGAG GTGTGCACTG GGTCTCCACC ACCTCTGCAC CTGAATTCCA GGACCGTGTT
  CTAGGCAGAG TCGGGCAGTA TACAGGGGAG AGTAACAATT AGACTCCACC ACTTTCAAGC
  AGGACGATCT GGCCAAAGTT TTGTTTAGGT ATAGACAAGA TTATCTGTGT AGCCCTGGCT
  GGCTTGGAAC TCTCTGTGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss46853814	NES10719424	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G		G	G	G		G
ss320865139	CHEV_3_107075206	CHEVERUD	SCREENING_POP	f	SNP										G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33762286					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46853814	NES10719424	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107179604 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	1481 bp proximal
Rr582952	regulatory region 582952	1735 bp proximal