rs33762611 SNP Detail

Summary

• ID
  rs33762611
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:37089403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGAAAGAAA TGTAACTGCC CCCTCCAGTG AGGGAAAATG
  TAACTGCCTC CTCGTGCCTC ACACCAACGT TTACAGTCTC CTCCTGTCTC TGCTTCCTCC
  R
  CGGATCACTG AAGAAAGACA GTGAGTGGAA GGAACCAGGA ACAGTATAAC CTGGATTCTT
  GGCTCAGCTT CACCGATTCC TTCTTTGTAC AAATATTTG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss46315777	mCV24874288	ABI	CRAMUS_MOUSE	f	SNP	G	G	G					A		G
ss61379693	NES16766909	PERLEGEN	MM_PANEL2	f	SNP	G		G	G	G	G	G		G	G	A	A		G	A		G
ss136309028	ENSMUSSNP2842572	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							G
ss322906207	CHEV_9_36985692	CHEVERUD	SCREENING_POP	f	SNP													A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33762611					SNP	G	G	G	G	G	G	G	A	G	G	A	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61379693	NES16766909	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:37089403 () rs orientation: forward

Symbol	Name	Function Class
Gm67648	predicted gene, 67648	within coordinates
Rr401317	regulatory region 401317	719 bp downstream
Rr676635	regulatory region 676635	1687 bp distal
Rr676636	regulatory region 676636	704 bp distal
Rr676637	regulatory region 676637	827 bp distal
Rr676638	regulatory region 676638	within coordinates
Rr676639	regulatory region 676639	473 bp proximal