rs33767104 SNP Detail

Summary

• ID
  rs33767104
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:41286419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTC CAGATCTGTC TGAAAGGAGC
  M
  TTTTGGTCTG ACGTGAATTA TTCTT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46316172	mCV22652729	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	C
ss136353014	ENSMUSSNP837360	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss322925103	CHEV_9_41183206	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33767104					SNP	C	C	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:41286419 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21612	CpG island 21612	1125 bp proximal
Mir100hg	Mir100 Mirlet7a-2 Mir125b-1 cluster host gene	1403 bp upstream
Rr677030	regulatory region 677030	within coordinates
Rr677031	regulatory region 677031	807 bp proximal
Tssr84498	transcription start site region 84498	1269 bp upstream
Tssr84499	transcription start site region 84499	1289 bp upstream
Tssr84500	transcription start site region 84500	1343 bp upstream
Tssr84501	transcription start site region 84501	1365 bp upstream
Tssr84502	transcription start site region 84502	1775 bp upstream