rs33768421 SNP Detail

Summary

• ID
  rs33768421
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:22791527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTTCCAA AGAAAACAAA
  CAGAACACTT AGAGTCCATC CATTGCTTCT TTATTTTATA GAGAGAGTAA AGAAGTGGAC
  TTTAAAAGTT GTTAAAGCCG GTGAATTTGT ATAGACCAAA ATTTAAACTT CAGTGTGAGC
  AAATATCTTA CTTCAATTTT CATGCAGCAT AAATGCATAA GTGGGGACCA CATGGAGCAA
  R
  TTTATGAAAG TAACTGAATA TATATATATA TATATATATA TATATATATA TATATATATA
  TATGTATATG TATATATGTG TGTGTGTGTG TGTGTGTATG TATGTGTGTG TGTGTGTGTA
  TGTGTGTGTG TGTGTGTGTG TATTCAGTTA CTATCAGTAG TCTCTATGGC CATTTACCTA
  AACACTTAGG ATAAAGTAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48353867	NES12244798	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33768421					SNP	A	A	A	A	A	A	G	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48353867	NES12244798	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:22791527 () rs orientation: forward

Symbol	Name	Function Class
Rr392416	regulatory region 392416	544 bp upstream
Vmn2r111	vomeronasal 2, receptor 111	within coordinates