rs33769187 SNP Detail

Summary

• ID
  rs33769187
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:22790607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGT TCTAAAAATC TTAGCTAAAT
  R
  TTATTTTCTC CCTCATCTAT GTTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
ss48353873	NES12244789	PERLEGEN	MM_PANEL2	f	SNP		A	A	G	G	A	G		G		G
ss145309933	ENSMUSSNP6106670	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A				A
ss325324627	CHEV_17_22708593	CHEVERUD	SCREENING_POP	f	SNP								A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
rs33769187					SNP	A	A	A	G	G	A	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48353873	NES12244789	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:22790607 () rs orientation: forward

Symbol	Name	Function Class
Rr392416	regulatory region 392416	1464 bp upstream
Vmn2r111	vomeronasal 2, receptor 111	within coordinates