rs33770374 SNP Detail

Summary

• ID
  rs33770374
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:70210429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAT GTTATGCAAT GAACGTCATT
  M
  CCGTTAGTCT CTCTCAGTGT GATGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46317885	mCV24205864	ABI	CRAMUS_MOUSE	f	SNP		C					A	C
ss52027872	NES15046051	PERLEGEN	MM_PANEL2	f	SNP	C	C	A	C	C	C		C	C	C		C	A	C		C
ss136606010	ENSMUSSNP451822	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C
ss322999469	CHEV_9_70150954	CHEVERUD	SCREENING_POP	f	SNP											A				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33770374					SNP	C	C	A	C	C	C	A	C	C	C	A	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52027872	NES15046051	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70210429 () rs orientation: forward

Symbol	Name	Function Class
Gm68929	predicted gene, 68929	244 bp downstream
Myo1e	myosin IE	Intron
Rr401496	regulatory region 401496	1707 bp upstream
Rr682349	regulatory region 682349	1553 bp proximal