rs33770789 SNP Detail

Summary

• ID
  rs33770789
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72503074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTTCTGAAAC ATGTAAAAAG CTCGTCTGAA TTCAATAAAA GAACATTTGT ACAATATGTT
  GAAGAAAGTC TGAGTTCAAG ATCCAGGAAA TTGACATTGT CAGCAAACTT CTATGACCAG
  GAAAAGTGTT TAACTGTTCT TTTATCATTT GGCACATCTA TAAAATGAAA TAGAGTGAAA
  CTGCATAAGG TTTATTTTAG TCTAAAATTA TAAACTTGTC TGAAGTAGAA AATCTTGAAA
  AATTGTCCAG AGATGTCTTG CTAGTTTCCT AAAAAAAAAA AAAAAATTTT TTTTTGTTTT
  K
  TGTTTTGTTT TTTTGAGGCA GGGTTTCTCT GTATAGCCCT GAGTTAAAAG AAATTTTTAA
  CAAGTGATGT GGTTTTTTTA AAGTTTGTTT ATTTATGTAT TTTATGAATA TGGGTGCATT
  GTCTGCATGC ATTTCAGAAA AGGGCATCAG ATCTCATTAT AGACAGTTGT GAGCTGCCAT
  GTGGGTTTTA ACAATTGAAC TTAGTATCTG AGCCATCTCT CCAGCCCCAA CAAATGATGT
  TTTCATGATA GACTATGAAC AAATCCATGA CATGCATATA TTCCTGAAGT ATTGGCCTTG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss46317612	mCV23623917	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs33770789					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72503074 () rs orientation: forward

Symbol	Name	Function Class
Gm37105	predicted gene, 37105	within coordinates
Rfx7	regulatory factor X, 7	within coordinates
Rr682776	regulatory region 682776	1282 bp distal
Rr682777	regulatory region 682777	909 bp distal