rs33771422 SNP Detail

Summary

• ID
  rs33771422
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:16617665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAACAATTA TGCTCTGTCA
  GAGATGAGAA GTGCACCATC AGCCATGAAG GGTTTACACC AGTGAAAACT GTACAGACGA
  CAGCTGGCTT TTTTGTTTAC TCTGTTTTGT TTTGCTCGAG AGTGGTCTTA GAAGCAAACA
  ATTGTTTTTC TCCTTATGCT TTCTTGACGT CTCTTCTCTA AGGACACAAG GTTCTTATTG
  Y
  TCACAAAGAT TGTTACATGC CAGACTCCAG GCTTCAGGCT TCAATTTTGT CATTCATCCC
  CTCTGGCTGG AACTTTTTTT TTTTGTCCTA ACAAGCATAC CTTCTTAAAG TTTGTTTGAA
  ATGTTAACAA CTTGGAGAGG TCCTCTCTGA CTTCCCTACT TAGTGGCATA TTCCTCTTAT
  ACTCCCCCAC ATTCTCCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss46855121	NES10963753	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs33771422					SNP	T	T	T	T	T	T	C	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46855121	NES10963753	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:16617665 () rs orientation: forward

Symbol	Name	Function Class
Maob	monoamine oxidase B	within coordinates