rs33771593 SNP Detail

Summary

• ID
  rs33771593
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107376209 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACACACATA CACACAACCA
  Y
  AGAGCTCTGG GTCCTATGTC CAACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J
ss46855944	NES10710094	PERLEGEN	MM_PANEL2	f	SNP	C	T	T	C	T	T	C	T	T	T		C
ss320865714	CHEV_3_107271811	CHEVERUD	SCREENING_POP	f	SNP											C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J
rs33771593					SNP	C	T	T	C	T	T	C	T	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46855944	NES10710094	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107376209 () rs orientation: forward

Symbol	Name	Function Class
D3Mit103	DNA segment, Chr 3, Massachusetts Institute of Technology 103	727 bp proximal
Rr582980	regulatory region 582980	1941 bp distal
Slc6a17	solute carrier family 6 (neurotransmitter transporter), member 17	within coordinates