rs33772581 SNP Detail

Summary

• ID
  rs33772581
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63691026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTGTGTCTG TGTCTCTGTC CCTCTCTGTC TCTGTCTCTG TCTCTGTCTC TGTCTCTCTC
  ACTCAAAAAG ACCTAACTCT GGAGAAGTCT GAGGAACCCC AAGTTCAGTC ACCTATGCTA
  GGGTGTCCTC AGGAAACTAC TAAGTGAGAA GAGCTGGCCA ACTAATTGCT CTGTTCCTGT
  TCTGCTTTGG AGTGTTTGTA ATGAGCTAAC TGCAGATCCA CCCACCCATC CATCCATCCA
  TCCATCCATC CATCCATCCA CCCATCCACC CATCCATCCA CCCACCCATC CATCCATCCA
  Y
  CCACCCATCC ATCCATCCAT CCATCCATTT ACTCATTCAG AAAGCTCGGT ATTTTTATTG
  TCTTACTTGA GAAAAACCAT ATGTATAGGA CATGGTAAAT GGGTGACACT CAGTGGTATA
  AACTCACAAA AACAACCCAG GGCACCAGCA ATAAAAGCCA AGCCAAGGCA GGATCACTAC
  GGCCCATGGA AGGAGTGGGA AGAGTTCGTG GATCTGTCCG AGTCCTGTGC TTTGGGGAGA
  CTTTGAGTAA ACAACAGGGC TCAGCAATTT GGCTGGGTGC ATGGCATGGG TTGTCAGGGT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss46318493	mCV22786526	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss136557742	ENSMUSSNP1745665	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs33772581					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63691026 () rs orientation: forward

Symbol	Name	Function Class
D9Mit31	DNA segment, Chr 9, Massachusetts Institute of Technology 31	569 bp proximal
D9Mit245	DNA segment, Chr 9, Massachusetts Institute of Technology 245	1153 bp proximal
Gm68073	predicted gene, 68073	within coordinates
Rr2253	regulatory region 2253	within coordinates
Rr2254	regulatory region 2254	214 bp proximal
Rr196447	regulatory region 196447	1426 bp distal