rs33774024 SNP Detail

Summary

• ID
  rs33774024
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr17:25673866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTCAGGAC AAGGGTATGG GGGTCACAGC TTCCTCTCAC
  AAGATTGGGC CAGAAGCCAT AATCTGAGGC CTCCCTTTAC TTCGGGTCAC CTGGCAAACA
  W
  ACCAAACCTT GATCCAGGAC ATGGGGCAAG GACTTTGAGA GTCTGTGAGT GTAGACATGG
  CCACAGAACT TCTGACCATG CAACTGAGCT GGACTTGAAC                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48355224	NES12238697	PERLEGEN	MM_PANEL2	f	SNP	A	A	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33774024					SNP	A	A	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48355224	NES12238697	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25673866 () rs orientation: forward

Symbol	Name	Function Class
Gm63608	predicted gene, 63608	within coordinates
Rr523577	regulatory region 523577	1762 bp proximal
Tekt4	tektin 4	Intron
Tssr143159	transcription start site region 143159	1150 bp downstream
Tssr143160	transcription start site region 143160	339 bp downstream