rs33776596 SNP Detail

Summary

• ID
  rs33776596
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:115060433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCTCTTAG CACCTTCTAT
  GAGGATGGGT TGTTGGCTGT GGGGTGAGCA AGGGCACCCT AGTGACATGG ATGGGGGAGA
  GGGAACTTAT GGACAGGAGG TAGAAGCTGA GGCTGGTACT TGGGAAACTG CCTCGAAGGG
  TCTCCTTCCT GGGTGGGTGC TTCGCTCAGA TGACAGAAAT CCTTGAAGCT TTCCCTGAGG
  R
  GAGTCCTGTC TATGCAACAG CTTGCCTGAC TCATATGGAA ATTTATTCAT TAAAAAGCAA
  AACAAACAAA CAAACAAACA AACAAACAAA ACCCCACTAC TTGAAGTTCT ATTTCTGGGG
  CTTGGTAAAA GCCACTGTCT GTGACAGGAC TAGGGACACA TGTCACCCTG ACACAAGGAT
  GCTTAGCTCC CCTTGATGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46317875	mCV23362047	ABI	CRAMUS_MOUSE	f	SNP		A	G					G
ss61227468	NES16843213	PERLEGEN	MM_PANEL2	f	SNP	A		G	G	G	A	G		A	G	G	G	G	G	G	G	A
ss137004583	ENSMUSSNP5139609	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33776596					SNP	A	A	G	G	G	A	G	G	A	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61227468	NES16843213	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:115060433 () rs orientation: forward

Symbol	Name	Function Class
2210411A11Rik	RIKEN cDNA 2210411A11 gene	1511 bp upstream
Osbpl10	oxysterol binding protein-like 10	within coordinates