rs33776601 SNP Detail

Summary

• ID
  rs33776601
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32627576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCATCTCA GAGGGGACTA
  CGGAGGGCAA GCCAGTTCTA CACTTGGCGA AAGAGACCTG TTAGATTGAG AGGGAGCAGG
  ATGAGCAAAA GAATAGCTCA TTCCTCAGCA GGCAGCCTTT GTGGTGACCT CATCTTCCTC
  CTAGCTCTGG TCCAGTTGGA GCTATGCATA CAGGGCAGAC TTCCAGTTCC TCCTGTCTGG
  R
  ACTCACAGGG GCAGATATAA ATAGACCAAG ACTTTGTCTG TAACCATTGT TCTCTGGCTG
  CCCATTGTTT CTGGTGCTGA AGCCTACCCC CTCCCACCAC CATTGCTCCT GCCCCCGACT
  CACTCTCACT GTGCAGAAGT TTGAATTTCA GCCTGGCTAT TTTCATTTGC ACTTGTCTGG
  TGCTTGGGGA GACCAGAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46317880	mCV22734127	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G	G
ss136250138	ENSMUSSNP4346668	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33776601					SNP	A	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32627576 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr368708	regulatory region 368708	985 bp upstream
Rr676235	regulatory region 676235	706 bp distal
Rr676236	regulatory region 676236	within coordinates
Rr676237	regulatory region 676237	1056 bp proximal
Tssr84287	transcription start site region 84287	479 bp upstream
Tssr88694	transcription start site region 88694	1828 bp downstream