rs33779241 SNP Detail

Summary

• ID
  rs33779241
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25516999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGCTCCCA GAAAGTAACA
  GTGACAGCTT GTGTCTTCCA CACTTCCATA TGCATGTCAT TATAGGGGGT GGCCATGTCC
  CCTAGAATCC AGCTTTGTGC TCTGACCCAA CAAGTCTGTA GTGCTTGGAA GACGCCCTCA
  CATCCTTCAA AATGGCAAAC ACCTCTGAGA CACAGCCCAG ATCCAGGGGT ATCATCAGCT
  Y
  CAGTTGGCAG GTTTCTGTGA GTGGAGGAGC AATGACTGTA GCCAAGGACA GAAGGAGGAC
  ATGTCAGAGT CTCTCCTGCT GTGCCTTGGG TGTGGGGCTG CGGACTAGTC TCTCCATCTT
  GTTTTTTTCT CTCTTTTTGA ATATTCAGTT TGCGGCCTGA CCCATCTACC GCAGGGCAGG
  CTTTCAATAC CTGCACAGCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss48355877	NES12244124	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs33779241					SNP	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48355877	NES12244124	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25516999 () rs orientation: forward

Symbol	Name	Function Class
Prss34	serine protease 34	369 bp upstream
Tssr143150	transcription start site region 143150	364 bp upstream