rs33779243 SNP Detail

Summary

• ID
  rs33779243
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25516714 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCA CTGGCAAGGA CCCAGCTGTT
  Y
  TGGGAGCTAG GACACTAGAA GTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
ss48355879	NES12244122	PERLEGEN	MM_PANEL2	f	SNP	T			T		C		T	T
ss145383626	ENSMUSSNP5893139	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss325337059	CHEV_17_25434685	CHEVERUD	SCREENING_POP	f	SNP							C			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	SM/J
rs33779243					SNP	T	C	C	T	C	C	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48355879	NES12244122	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25516714 () rs orientation: forward

Symbol	Name	Function Class
Prss34	serine protease 34	654 bp upstream
Tssr143150	transcription start site region 143150	649 bp upstream