rs33784065 SNP Detail

Summary

• ID
  rs33784065
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107457357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTCTGGG GAAGCTCAGC
  CGTGCCCTCC ACTTCCTCCC ACTCGTGCCC CTCTTCCCCA GTTTAAAACA GCTGGAAGCT
  TTAAACAACA ACTGAAGTCT CACTTAATCC TGAGCAAATA GGCTGGGGGA AGGGAGCAAA
  TGAGGGGTGG AAGCAGAAAG CTCCAGGGCT TACGTTTAAA ATCAGACATC CAGGCATCCT
  K
  TGAGCTCTGG TGCAGTGCAA GCTTCTTTCA CATCTGCAGG ACTTTTCACC CAGGCAGACC
  ACTGTCTTCC TGGCCATTCA GAACTAGGGG TAAATTTCCA GGCATAGTCA TAAGCCCATA
  GTCCCCGTAT TTGGGAGACT GAGGCAGGAA GGTTGAGAGT CCAAGGAGGG TCTGGTATAC
  ACAGTGAGAT CCTGTTTCCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46857093	NES10706063	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T	G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33784065					SNP	G	G	G	G	G	G	T	G	G	G	T	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46857093	NES10706063	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107457357 () rs orientation: forward

Symbol	Name	Function Class
Gm36097	predicted gene, 36097	within coordinates
Rr582997	regulatory region 582997	471 bp proximal
Rr582998	regulatory region 582998	550 bp proximal