rs33784071 SNP Detail

Summary

• ID
  rs33784071
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107457450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGTCTCAC TTAATCCTGA
  GCAAATAGGC TGGGGGAAGG GAGCAAATGA GGGGTGGAAG CAGAAAGCTC CAGGGCTTAC
  GTTTAAAATC AGACATCCAG GCATCCTGTG AGCTCTGGTG CAGTGCAAGC TTCTTTCACA
  TCTGCAGGAC TTTTCACCCA GGCAGACCAC TGTCTTCCTG GCCATTCAGA ACTAGGGGTA
  W
  ATTTCCAGGC ATAGTCATAA GCCCATAGTC CCCGTATTTG GGAGACTGAG GCAGGAAGGT
  TGAGAGTCCA AGGAGGGTCT GGTATACACA GTGAGATCCT GTTTCCAAAT AAATAAGCCA
  GAAGCAGGAG GAAAGAAACG TGGCTTACCT GGCACATCTG ACAAATCCTG GGTCAGAGCA
  GGGTACCAGG GATTTCCCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46857099	NES10706067	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33784071					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46857099	NES10706067	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107457450 () rs orientation: forward

Symbol	Name	Function Class
Gm36097	predicted gene, 36097	within coordinates
Rr582997	regulatory region 582997	378 bp proximal
Rr582998	regulatory region 582998	457 bp proximal