rs33794060 SNP Detail

Summary

• ID
  rs33794060
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107731435 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCCTCCTGG AAGACAGGCT
  GAGTCCACAG GCCCAACATC AGGGACCAAA TCCAAACTCC TTCTTCCCTG TTTATCCCAT
  CAGTATCCCT GCCATCTAAC TTGGCCCAAG CGATAGGCAC AGAGGTTCAG CTCTGGTCCT
  CAGATGTAGC TAAGGCTCTT AGCCAGGAAA CCACTGATCT GGGTCCCAGT GGGCCAACCC
  R
  TGCTGCAGAC AGGCCCAGAC GGAGCATGCT CAGTCTGATG GGGATTCATG TAGTCCTACT
  AGTGCACCAG TGACATCCTA GAGGAGGTCA GGAATCCTTA GAGGTACTGA CTATTTCCCT
  AGACGCATGC CCCAAGAATC CTTCAACCCC ATTTGCATCC TTCTCCAGCC ACTTTTCTGT
  TAGTTTTGAT TAGACACCTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46859418	NES10694155	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33794060					SNP	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46859418	NES10694155	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107731435 () rs orientation: forward

Symbol	Name	Function Class
Gm36211	predicted gene, 36211	within coordinates
Rr583053	regulatory region 583053	533 bp distal
Rr583054	regulatory region 583054	1418 bp proximal