rs33795078 SNP Detail

Summary

• ID
  rs33795078
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28020559 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aacttcagt tccaaagact ccaacaccct
  cttctggctt cctagagtac tgcatgcata tgatgcacag acatacatgc acacaaacat
  tatatatgag acaaTCACAA CCATAGAACC ACATACCCTC TACTGGCCTC CACAGCCCTG
  R
  CACTGTGTGC ACACATCAAC AAGGacacac gcacatgtac atacatacac acacacacac
  acacacacac acacacacac ggaccataaa gatggcttag caagtgccag catctgttcc
  aaccacggcg gcctgagtac aaggtgggag                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss48358674	NES12231336	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A		G	G	G		G
ss325349711	CHEV_17_27938530	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33795078					SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48358674	NES12231336	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28020559 () rs orientation: forward

Symbol	Name	Function Class
Ilrun	inflammation and lipid regulator with UBA-like and NBR1-like domains	within coordinates
Rr330150	regulatory region 330150	within coordinates
Rr392473	regulatory region 392473	360 bp downstream