rs33803677 SNP Detail

Summary

• ID
  rs33803677
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:30330483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGCTTCA GTGCCCTGTT
  TGAAAAGGTT GGGGTGAGAG AGGAATCAGA AGAAAGGAGG ATGGTGATTC CACAGCCCCT
  TCCCCTTGAT AACACCAAGG CAGCTTTAAG TTTCAGTTAT TCCCACAAGG ATAAGGTAGA
  CCCTGGTAGG ACCTGGCTCT GTCAGTGGAA TTGAAAAGCT GTGCTTCTGT CCTGTCCGCG
  R
  ATATACTTCC CTTCTTCTCC TCAGGTAGGT GGTGGTCTGT GATCTCTCTC AGGAACAGAC
  ACCTGAGGAT CATGGGTAAA CATGAGCAGC AGCAGAGGGA ACGTCTCACT TCCTCACCCA
  TGACACACAC CACATTGGAG GTGATGGGGA TGCCGGCACC ACCTAAGATT TCACTCCACA
  GAGCTGCCAA GGGCGGCCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48362133	NES12220101	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33803677					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48362133	NES12220101	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:30330483 () rs orientation: forward

Symbol	Name	Function Class
Gm53994	predicted gene, 53994	within coordinates
Zfand3	zinc finger, AN1-type domain 3	within coordinates