rs33810462 SNP Detail

Summary

• ID
  rs33810462
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:51548302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGAAACAC ATTAATCTAG
  ATTTAAAGTT ATAAATAACA AAACCCTAAG AAATGAGAAA GGGGGGGAGA GAGAGAGACA
  GAGAGAGACA GAGAGAGACA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAAAAG AGTATTTGAT CACCACACTG GGAACTCCAG GAGCATATCT GAGCCTAAGG
  R
  CTCAACGACG GCAAATGGAG AAGTCTGGGT CTGTAGGTGT GCTGTTGCAG AAGAGCTAAT
  CAGAGGCTCG GCAACCGCAG GAGCTCAGCT CACCCAAGCA TGAGTCATCA AAGCTTAGAA
  GGAAGCCACT CAGCTAGGGA ATCCGAGAAG TTAACTAGCA CATGACACCA TTGAGCCTGT
  CCAGAGCCAG GCCCACTACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss47348984	NES11075029	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33810462					SNP	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47348984	NES11075029	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:51548302 () rs orientation: forward

Symbol	Name	Function Class
Gm17767	predicted gene, 17767	362 bp downstream
Gm70899	predicted gene, 70899	within coordinates
Rr33786	regulatory region 33786	within coordinates