rs33810557 SNP Detail

Summary

• ID
  rs33810557
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:35728855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTTAGGTTT TGCTGTACTA
  GCCAGTAGTC CCCACACCAT CTAGATACCC ATAGGCAGCA ATGCAACAAC CTTGCCATCA
  AGTTCACAGT GCCTAGCAAG AACAGCAATT GGTCTGCTGG TTCTGAACTC TGGACTTAAC
  CCAGGACTGT GGTTACCAGA CAGGGACTCT GCATTGGAAA TAAAGTACCT GTAGCCTATT
  Y
  CAACTTCTGA AACCATACTG TAACCCCTAT TGTTTCAGGG TACATGCTGA CCCCAGAAAA
  TGCTTGATGG GCTTGTACCT CAGGGCTTAG TCCATGCATT TATTGCCTGG TTGTAAACAC
  GACTGAGGAT TTTTATGTTC TTTTTTTTTT TTTCCATTTT TTATTAGGTA TTTAGCTCAT
  TTACATTTCC AATGCTACAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47849457	NES11951864	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33810557					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47849457	NES11951864	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:35728855 () rs orientation: forward

Symbol	Name	Function Class
Gm40623	predicted gene, 40623	within coordinates
Gm47046	predicted gene, 47046	within coordinates
Rr384484	regulatory region 384484	594 bp upstream