rs33811241 SNP Detail

Summary

• ID
  rs33811241
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:51548900 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCTATATT AAAATTTTAA
  AACATCTACA AACTAACCAT AACGGCTCAT ACCTCCCTAT AATCCTAGTT AGTTGGGAGG
  CTGAGGCAAA TGGACTGTCA ACAGTTCAAA GCCAGTCAGG GCTATGCAGT AAAACCTTGT
  TTTAACAAAT CAAACCACCA ACGGTGTTAT CAGAGTACCT TCAACTATTT GCCTTTCTCG
  R
  CAATGTTTTC TTCTCTTTCT AACATCAATT TCCCTCATCT GGGGAGTAGA GACAGTAACT
  GGAAGAGGCA GGCTTATGAT GATCTAGAAG CTCAGTTTCT GGGGAAAGGA AGGCCTCTTT
  TGTCAGAATT CTTCGAAATC TCATGGGAGC TTTTTTTTCA CTGATTCAGC TGGGTCTGTC
  TCCGTCCTCA GAGAGAAATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47348993	NES11074957	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33811241					SNP	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47348993	NES11074957	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:51548900 () rs orientation: forward

Symbol	Name	Function Class
Gm17767	predicted gene, 17767	within coordinates
Gm70899	predicted gene, 70899	within coordinates
Rr33786	regulatory region 33786	within coordinates