rs33814649 SNP Detail

Summary

• ID
  rs33814649
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142011257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAC TGTTTTATAC TGTTTTATAC
  Y
  ATATGGAGTC CCTTAGAGTA GGGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss47350680	NES11530057	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	T	T		T	T		C
ss322471334	CHEV_7_149643425	CHEVERUD	SCREENING_POP	f	SNP								C			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33814649					SNP	T	T	T	C	T	T	T	C	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47350680	NES11530057	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142011257 () rs orientation: forward

Symbol	Name	Function Class
D430042D18Rik	Riken cDNA D430042D18 gene	698 bp upstream
Rr154798	regulatory region 154798	within coordinates
Rr154799	regulatory region 154799	1144 bp proximal