rs33834518 SNP Detail

Summary

• ID
  rs33834518
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:15304386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGTCTTTT GTTCGTGGCA
  AGTTATTCTG TTTACTGGAC AGTGAAGGAG TTTGGACACA ATGAAATATG AAATTTATTT
  ATCATTGAGA TGAGACATTT GTTGGGAGTT TTGGAGGGGA AAGGGAAGAT GGCATGGCAT
  GGAATGGATG ACTTTTATGG AATGCTGACC CAAGCAGGGG AGCTTGTAAG ATTTTCCATA
  K
  GTATTCTCTG TTTATTCCTG CCTGGAACCT TTAGATTATC TATTTCAACT GCCCATGCAC
  AAGACAAGAG AGAAAAGTTC CAGGTGGTGA CATGGAATTC CTTATTTATA TACATATGTC
  TTGTTCCCTT AGAACATCTA GTATTCCTCT AGGTCCCTTG TCTTCTACGA ACCTCATAAT
  GCCCAATTGG CCCTGAAATC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	PWD/PhJ	WSB/EiJ
ss47358128	NES11370221	PERLEGEN	MM_PANEL2	f	SNP	T	G	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	PWD/PhJ	WSB/EiJ
rs33834518					SNP	T	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47358128	NES11370221	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:15304386 () rs orientation: forward

Symbol	Name	Function Class
Gm61108	predicted gene, 61108	251 bp downstream
Rr638	regulatory region 638	513 bp proximal
Rr766	regulatory region 766	within coordinates
Rr2063	regulatory region 2063	within coordinates
Rr475207	regulatory region 475207	492 bp proximal