rs33835102 SNP Detail

Summary

• ID
  rs33835102
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42418884 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACACTGGT CTGAGACCAC
  ACCAAATAAA CGTTTGCTTC ACCCTTAGGC CTCCAGCACA GGTGCTGCTG ACAGAGAGAA
  TGAAGGTGAT GTGTGGGATG GTCACAGGGA GAGGACACCC CCATTTTCCC CCAAAGACAG
  CTTAAGGTGA GGGACAATAA ATACACTTCC CGTCTGACAA GCCAGGGCCC GGTGGTGTCC
  R
  TACGGCTCTT TCCTCTGCTC CCGCCCCTCA TCGACTCCTC TCTTTAGCTG CCAAACTAAT
  CATTTCTGTA GGTGTTAACT ATCATGGAGA GATGGCTTTT CCTTGGACTT GCACTGGGAT
  TCCCAAGAAG GAAGGAGCCT CCTCTTGCCT CAAGCAGGAA CTGTGCAAAT GTCCTCAGAT
  GCTCCAACAC CCGAAGGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47856007	NES11956048	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33835102					SNP	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47856007	NES11956048	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42418884 () rs orientation: forward

Symbol	Name	Function Class
Rr222699	regulatory region 222699	826 bp proximal