rs33835465 SNP Detail

Summary

• ID
  rs33835465
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:15304991 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATGTTTTTG GTTTTGTATA
  CTTACCTGCT ATGAAACTCA AGGTTCTCCA GGAGCAGCAA AGTCAGTAGT AAATGTATAT
  TATAAGATTT ATTAAAAAAG AATTTGTTTA TATAACTTCA TGATCGGCCC TTTGGCCAGC
  AGTGCTCAAA TAGTGAGAGG GCTCCATATA AGGAGTCTTC TGTCCTGTGA AAGTAAACAT
  K
  CCTGAACTCC AGTTCACTCT GCTACACATT TTCCTCTGTA TCACTTAAAG CTGGAGATTG
  AACCCATTTG GTGTTGTGCC CAGACTCCAG CTTCTATGTA GCTGGCTAGC CTCCAGGGAT
  AATTTGATGT TCTGCAGTGT GACAATAATA ATTTAGCTTC TGTAGTAAAA TGGAAAGTAA
  AAATTAGAGT GGGAGGGAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	PWD/PhJ	WSB/EiJ
ss47358137	NES11370224	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	FVB/NJ	PWD/PhJ	WSB/EiJ
rs33835465					SNP	G	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47358137	NES11370224	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:15304991 () rs orientation: forward

Symbol	Name	Function Class
Gm61108	predicted gene, 61108	856 bp downstream
Rr638	regulatory region 638	within coordinates
Rr766	regulatory region 766	within coordinates
Rr2063	regulatory region 2063	514 bp distal
Rr475207	regulatory region 475207	within coordinates