rs33836126 SNP Detail

Summary

• ID
  rs33836126
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42419045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACACTTCCC GTCTGACAAG
  CCAGGGCCCG GTGGTGTCCG TACGGCTCTT TCCTCTGCTC CCGCCCCTCA TCGACTCCTC
  TCTTTAGCTG CCAAACTAAT CATTTCTGTA GGTGTTAACT ATCATGGAGA GATGGCTTTT
  CCTTGGACTT GCACTGGGAT TCCCAAGAAG GAAGGAGCCT CCTCTTGCCT CAAGCAGGAA
  Y
  TGTGCAAATG TCCTCAGATG CTCCAACACC CGAAGGTTCA CCAAGTGCAA GACTAAAGAA
  AGCAGCTAGT TTGTTCAGCC TTGGAAATTT TAAATAGACT GATTTTTTTA AGTATTAAAA
  TATAAATCAT CTCATGAATA TCAAGCTATT ACATTAACAA AAAGAAAGCA TGGTTCATGG
  CTTGGGCCCT GGATTTCTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47856011	NES11956050	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33836126					SNP	C	C	C	C	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47856011	NES11956050	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42419045 () rs orientation: forward

Symbol	Name	Function Class
Rr222699	regulatory region 222699	665 bp proximal