rs33836132 SNP Detail

Summary

• ID
  rs33836132
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42420733 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGAGTATG AACATCCAGA
  GCCACACCTT GAAATGGACA CAGTGACCAC ACCTACAGTG CCAGCATTTG GGAAGTAGAG
  CTAAGAGTGC TGTAACTTTG AGCTAACTCT GGCCTTAGAC CAGAGGGGAT TCCAGACCAG
  CTAAGGGCTG CAGAGCAAGA TCCGGTCCCA GAAAGACAAT TTCCAGCCCA TCTTACGAGA
  R
  TGTTTAAGTA GCCCTTTAGA TGGCATACAG GTATCCAGAG AGCAATTCTG TCTCCCCCTT
  GCTCTCCAGC TCCCTAAGGT GTCCTCTGTA ATAGAGGCTT ATTCAGTAGA TGTGTTCCTG
  GCTGTAGGAT AGGCATCAGG CCCTCGGGCA TAGCGCCATT GACTTCAGGG TCCCAGGAAG
  ATGTCCCTGT CTCTGGGTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47856017	NES11956054	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33836132					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47856017	NES11956054	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42420733 () rs orientation: forward

Symbol	Name	Function Class
Rr219444	regulatory region 219444	1468 bp proximal
Rr222699	regulatory region 222699	655 bp distal