rs33838610 SNP Detail

Summary

• ID
  rs33838610
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:15257584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGATAGT GAAATTGCCT
  GCTTCTTTCA CTGTTCCTTT AATGTCTAGC AATTCTTTAA GCCCAAACAT TCCTGAGTAT
  AGTTTATACC AAGATTTTTT CATTTCTTCT TCTAGTAGGT AGCCAAAACG TCTCTATAAA
  AAGTTCTTTA AGTGTAGACT TTTCTCTCCA TTTCTTCTCC ACTTCTAGCT CCAGTCTTTG
  R
  TAATTATATA AAAATCTATA TGTATGCGTA ATAAAATTAA TTTTAAAAAG TGATGAAGAA
  GTAAATACAT ATACAACTAT ATCATGTAAG TGGGTCTCAA GACTGGAGAC ATAGTTCATC
  TTCCTTATTA GCATGCAATA AAGCGTGAGA TATGATGTAA GAGTCTGACA TCACTCCTTG
  ATATTTGCAT ACTCATGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47357684	NES11371521	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33838610					SNP	A	A	G	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47357684	NES11371521	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:15257584 () rs orientation: forward

Symbol	Name	Function Class
Rr803	regulatory region 803	within coordinates
Rr2234	regulatory region 2234	within coordinates
Rr275170	regulatory region 275170	within coordinates
Rr275171	regulatory region 275171	1617 bp proximal