rs33844333 SNP Detail

Summary

• ID
  rs33844333
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:33202321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGACTCCAG AGAAGTATAG
  GCCTGAGCCG AATGTCTACC ACAAATGTGT GACCCCCAGG AAGAACACTA TGGCCTCAGT
  TTGGTCTGAA AAGCCATAGC TTTCCTCAGA GGAGGCTCTA AGGAGCCCTG CTGGCACACT
  CATCATGAGA ACTGTGCTAA CTGATAGAAA ATTCTAAGGA AGGCCATTTT TCTATGCTAA
  M
  GCTGTATATC ACACTATTTT ACCCAGCCAG GTAGGTGTGG CCTGAAGACG TTTCCCAAGC
  CAAAGTCTCA CTCAGTTGGG GAAGATGTTT TCATTACTAA GGGTCTCAAC CAAACTCTAA
  ACAAAACAAA ACTAACTTGT AGACAAAGAA TGGCATCCAC GTGTCTCAGA AGGGCCCTTA
  ACTATGAAAC AGATTATCAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39023130	mCV23134798	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss137582771	ENSMUSSNP3311645	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33844333					SNP	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:33202321 () rs orientation: forward

Symbol	Name	Function Class
Atxn7l1	ataxin 7-like 1	within coordinates
Rr260247	regulatory region 260247	521 bp distal
Rr260248	regulatory region 260248	within coordinates
Rr267129	regulatory region 267129	480 bp proximal