rs33846839 SNP Detail

Summary

• ID
  rs33846839
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:65206903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAGCTGGG CTTTTAATCA
  CAGCACTCAG GAGGCAAGGC AGGCAGATCT CTGTGAGCTG GAGGCCGGCC TGGAGTTCCA
  GGACAGGTAG GGCTACACAG AGAAACCCTG GGGGCAGAGG GAGATTGGGG ACAAGGAGGG
  AATTGGGTTA GCTGGAGAGA TGGCTCAGTG GTTGGGGTCA CTGACTGCTT TTCCAAAGGA
  Y
  CCAGGTTCAA ATCCCAGCAC TCACATGGTA GCTCACAACT GTCTTTAACT CCAAGATCTG
  ACACCTTCAC ACAGACATGC ATACAGCCAA AACACCAATG CACATAAAAT GGAAATAAGT
  TAATTTAAAA ACATTTCCCT TTACCATCTC TTCTTGCCTC CACTTCACCT TCTATACTTA
  AATTATGCTG AGGTTAGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38933870	mCV23638450	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
ss137833013	ENSMUSSNP5261011	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss324072236	CHEV_12_66261116	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33846839					SNP	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:65206903 () rs orientation: forward

Symbol	Name	Function Class
Mis18bp1	MIS18 binding protein 1	within coordinates
Tssr116466	transcription start site region 116466	924 bp upstream