rs33847136 SNP Detail

Summary

• ID
  rs33847136
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52653458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTTTCCC ATCCTGCAAC
  CCTCCCGTCA ACACTGCATA CATTACACTA AACATGTTTA CTCAGTATTA GACTTTTGCT
  ATAAATTATG TTCATGTCTT ACACCACACA TTTGCAATAT TAAAATGCTT TGGCTTCTGA
  TGAACTCAAA ATATGTTTAA ACCGGGTGTG GTGGCTCATG CCTTTAATCC CAGCACTTGG
  R
  AGGTAGAGGC AGGCAGATTT CTGAGTTTGA GGCCAGCCTG GTCTACAGAG TGAGTTCCAG
  GGTAGCCAGG ACTAAAACAA AAACAAGCAA AAAAATTGTT TAAGATCCCA CATTAACAGT
  TTAATTTTAA AAATCCTGCT CTTTTACCCT AAAGTATATG TGATCAACCA GTCTTTTCAT
  GGGGAAATAC TGGTTTTTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38902082	mCV22548537	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss137738393	ENSMUSSNP2506798	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33847136					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52653458 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4597	CpG island 4597	1640 bp distal
Gm35239	predicted gene, 35239	within coordinates
Gm59577	predicted gene, 59577	866 bp upstream
Rr369517	regulatory region 369517	1692 bp downstream
Rr403284	regulatory region 403284	1958 bp downstream
Rr466027	regulatory region 466027	1793 bp distal
Rr466028	regulatory region 466028	1015 bp distal
Tssr113445	transcription start site region 113445	963 bp upstream