rs33849436 SNP Detail

Summary

• ID
  rs33849436
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:3441591 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCTAGAG GGATCAGCCA
  ATAAGCTTTC CTTCCCAGAC ATTCCTCAAA AGGTATTTAA TCTCAAGCCC ACCCTGAGAA
  GTGGGGCATG GTTTTACACA TCCACTTTCT GCCATGATAA TAAATGCCTT AAAACCATGG
  GCTATCTCTT TTCATTAGAA TCTGCCATGG GGAGCCATGG AGAAGGCCTT TGTCTTTAGA
  S
  CCGGTAAGGC CTCTCTGTGC TCCCAGCCAC AGCTGCTACC AAGCCCAAGC CCAAGCCAAG
  GACTATCCCC AAGGGACCAG CCAGAACTTT CCCCCTTACC TCACCCCAAC CCCAGCCATA
  GGTCAGATCC AGCCTGCGGG GGATGGGGGA GGCACTACAT TCTCAGCTCT TCCATGACAT
  CCATCTCCTG GATGTCCAAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss38595269	mCV27573912	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C
ss146750969	ENSMUSSNP5484433	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	C		G
ss323243171	CHEV_10_6854950	CHEVERUD	SCREENING_POP	r	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33849436					SNP	G	G	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:3441591 () rs orientation: forward

Symbol	Name	Function Class
Gm66845	predicted gene, 66845	within coordinates
Rr222535	regulatory region 222535	1206 bp distal