rs33851384 SNP Detail

Summary

• ID
  rs33851384
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:62748257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCATGCAA GTAACTTTTC AACCGGAAAA
  GACCCATTGC CCTCAGGGAT GCTGTATCAG CACAATGTTG GCCAAGGTAG TCACACACAG
  GCTACAGGCA CTTAGACTGC AGAGAGCATC TGTGCTCTAA AGGATAGGGA AACTATTCCa
  K
  caatcaatca atcaatcaat caatcaatca atcaaccaac caaccaacca atcaatcatt
  caaCCTctct ctccttctct cccttcctcc ttccctcctt cccACCTCTG TCTGTCTGTc
  agactgacag actgacagac tgacTATCTC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39625634	mCV24030078	ABI	CRAMUS_MOUSE	f	SNP	T	G	T
ss147273288	ENSMUSSNP2827670	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss325650767	CHEV_18_62774840	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33851384					SNP	T	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:62748257 () rs orientation: forward

Symbol	Name	Function Class
Spink10	serine peptidase inhibitor, Kazal type 10	within coordinates
Spink13	serine peptidase inhibitor, Kazal type 13	within coordinates
Tssr153633	transcription start site region 153633	490 bp downstream
Tssr153634	transcription start site region 153634	531 bp downstream
Tssr153635	transcription start site region 153635	556 bp downstream