rs33852039 SNP Detail

Summary

• ID
  rs33852039
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:82930255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTA AGGTCCCAGG TTCAACCTTC
  M
  ATCTAAAAAA AAAATAGATA GCGTT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45869407	mCV23177975	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A	A
ss133345728	ENSMUSSNP668630	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33852039					SNP	A	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:82930255 () rs orientation: forward

Symbol	Name	Function Class
Gm19287	predicted gene, 19287	138 bp downstream
M1ap	meiosis 1 associated protein	within coordinates
Tssr57262	transcription start site region 57262	531 bp downstream