rs33856094 SNP Detail

Summary

• ID
  rs33856094
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175306964 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGTTTGTTG TTTGTTTGTT TGGATTTTTT GCTTTTGTGT
  ATTGTTATTG TTTTGGGGGG GAAGGGTTTT GGTGTTTTGT TTTGTTTTTT GGTCTAATAA
  R
  GTGGAATAAT GATAGAGAAG CCCAAAAAAG AGGGCAAAGG TGAAAGCGGG GAAAGAGAGC
  AAAAAAAGAG AGGGAGAATA AAAGAAAGCA AGGACTAAGA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ
ss46693446	NES10687409	PERLEGEN	MM_PANEL2	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ
rs33856094					SNP	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46693446	NES10687409	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175306964 () rs orientation: forward

Symbol	Name	Function Class
Rgs7	regulator of G protein signaling 7	within coordinates
Tssr15391	transcription start site region 15391	12 bp downstream
Tssr15392	transcription start site region 15392	141 bp downstream