rs33857751 SNP Detail

Summary

• ID
  rs33857751
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:85892671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTTCTCCT CTGAGAGGGT GACCCCTCCC CCCGCCCCCA
  ATATCAAGTC TCTGCCAGAT TAGGCACGTC CTCTCCCACT GAGGCCAGCC AAGGCAGCCA
  W
  GAAGCCTGAG CTGCCTGACT GCTATGTATG TGTGGGGGGA GTGGGGAGGG GAGGTGGCAA
  GGGATTCGTC CCAGCCCGTG TTTGTTCTTT GGTTGGTGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss38626033	mCV27559962	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss147216536	ENSMUSSNP5177508	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
ss323373262	CHEV_10_85519552	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33857751					SNP	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:85892671 () rs orientation: forward

Symbol	Name	Function Class
Rr217171	regulatory region 217171	71 bp distal
Rr223758	regulatory region 223758	444 bp proximal
Syn3	synapsin III	within coordinates
Tssr98759	transcription start site region 98759	811 bp downstream
Tssr98760	transcription start site region 98760	828 bp downstream