rs33857919 SNP Detail

Summary

• ID
  rs33857919
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:86457227 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CATTTCTTGC CACACGAATC CTGATATTTG TAGGACAAGA
  GGCCCACACT CTCTTATGGG CCAGCTCTAA ATAAGGGTAA AGATGGGCAC AACGGCCCAT
  S
  TCGTTGGTGG AAGACCAGAG ATAAAGAGAT GTGTTGGTGA TGGTGGTGAC ATAGGGTGTG
  GATTCCCAGG CTTTGCTGAA GTTGTATATC CATGCTCCA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss38654499	mCV23610537	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33857919					SNP	C	G	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:86457227 () rs orientation: forward

Symbol	Name	Function Class
Gm48473	predicted gene, 48473	436 bp upstream
Gm48474	predicted gene, 48474	within coordinates
Gm48475	predicted gene, 48475	893 bp downstream