rs33858128 SNP Detail

Summary

• ID
  rs33858128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:51744150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAACTCTT TTTTTTTTTT
  TTTTTTTTTT TTTTTTTTAA TTTTCTTTTC CAGGACTAGA AATTGAACCC AGGGCTTTGT
  GCATGCTAGG CTAGCACTGC TATTCTCTTC CCAACCCTTC TTTTTGACAT GTATTTATGT
  GGGGAGGGGA GGTGTAGGGG GGAATACACA TGTGCACATA CACAGACATA TATCAGGGCA
  Y
  ATGTGGAGAT CAGAAGGCAA CTTGGTGGAG TCATTTCTTC TGCCATATGT GGACAAAGTG
  GGAGGTGTCA AATACAGGTC ATCAGGCACA ACAAACACCC TTCACCCACT GGGACATCTT
  GCTGACCCTA CTTTATATTT TGACAGTGTC TGGCTAAGCT GCCCAGACTG GCTAGACTCT
  GGCCAGGACA GGGCTTGAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39040995	mCV24841710	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss137724539	ENSMUSSNP3400929	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33858128					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:51744150 () rs orientation: forward

Symbol	Name	Function Class
Ap4s1	adaptor-related protein complex AP-4, sigma 1	within coordinates
Rr256575	regulatory region 256575	1750 bp distal