rs33859936 SNP Detail

Summary

• ID
  rs33859936
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180625904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCA TGACGACTCA CAATGAAGCA
  Y
  AACTCTGGTT CCAAGAGGTC CTATG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45125927	mCV24576330	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
ss146386148	ENSMUSSNP4971843	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33859936					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180625904 () rs orientation: forward

Symbol	Name	Function Class
D1Mit509	DNA Segment, Chr 1 Massachusetts Institute of Technology 509	1884 bp distal
Rr424584	regulatory region 424584	1387 bp proximal