rs33861819 SNP Detail

Summary

• ID
  rs33861819
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60322799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAATGCAAA TCAAAATGAC
  CCTGAGATTC CACCTCACAC CAGTCAGAAT GGCTAAGATC AAAAATTCAG GTGACAGCAG
  ATGCTGGCGA GGATGTGGAG AAAGAGGAAC ACTCTTCAAT TGCTGGTGGA ATTGCAAGCT
  GGTACAACCA CTCTGGAAAT CAGTTTGAGG ATTCCTCAGA AAATTGGACA TAGTTCAACC
  R
  GAAGATAGAG AAATACCACT GCTGGCATAT ACCCAGAAGA TGCTCCAACC TGTAATATGG
  ACACATGCTC CACTATGTTC ATAGCATCCT TATTTATAAT ATCCAGAAGC TGGAAAGAAC
  CCAGATGTCC CTTAACAGAG GAATGGATAC AGAAAATGTG GTACATTTAC ACAATGGAGT
  ACTATGAAGC TATTAAAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45479522	mCV22663031	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss135219116	ENSMUSSNP4961420	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33861819					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60322799 () rs orientation: forward

Symbol	Name	Function Class
Gm54175	predicted gene, 54175	within coordinates
Rr577390	regulatory region 577390	1272 bp distal