rs33865034 SNP Detail

Summary

• ID
  rs33865034
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:69556142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGG TGGGGATGGG TACCGTCACA
  R
  CCTCCCTGGA CCTTGGTTTT GTTGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss46435575	mCV25183004	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss323730975	CHEV_11_69478818	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33865034					SNP	A	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:69556142 () rs orientation: forward

Symbol	Name	Function Class
Cd68	CD68 antigen	within coordinates
Eif4a1	eukaryotic translation initiation factor 4A1	1620 bp downstream
Gm73992	predicted gene, 73992	within coordinates
Rr450060	regulatory region 450060	1137 bp distal
Rr450061	regulatory region 450061	736 bp proximal
Tssr102508	transcription start site region 102508	1132 bp downstream
Tssr102509	transcription start site region 102509	1097 bp downstream
Tssr102510	transcription start site region 102510	963 bp downstream
Tssr102511	transcription start site region 102511	928 bp downstream
Tssr102512	transcription start site region 102512	285 bp upstream
Tssr102513	transcription start site region 102513	321 bp upstream
Tssr102514	transcription start site region 102514	366 bp upstream
Tssr102515	transcription start site region 102515	395 bp upstream
Tssr102516	transcription start site region 102516	1156 bp upstream
Tssr102517	transcription start site region 102517	1186 bp upstream
Tssr108748	transcription start site region 108748	934 bp upstream
Tssr108749	transcription start site region 108749	857 bp upstream
Tssr108750	transcription start site region 108750	828 bp upstream
Tssr108751	transcription start site region 108751	799 bp upstream
Tssr108752	transcription start site region 108752	386 bp upstream
Tssr108753	transcription start site region 108753	196 bp upstream
Tssr108754	transcription start site region 108754	within coordinates
Tssr108755	transcription start site region 108755	41 bp downstream
Tssr108756	transcription start site region 108756	68 bp downstream
Tssr108757	transcription start site region 108757	259 bp downstream
Tssr108758	transcription start site region 108758	502 bp downstream
Tssr108759	transcription start site region 108759	520 bp downstream
Tssr108760	transcription start site region 108760	576 bp downstream
Tssr108761	transcription start site region 108761	749 bp downstream
Tssr108762	transcription start site region 108762	762 bp downstream
Tssr108763	transcription start site region 108763	846 bp downstream
Tssr108764	transcription start site region 108764	1909 bp downstream