rs33868039 SNP Detail

Summary

• ID
  rs33868039
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:78964678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCCCCTTAT TAGTTTTGCT TCTTTTATTT ACTATAGGCC
  CCTGCATAAT TAACAAGATA ATGGCTTTCT TCAGACAGCA GGTCAGTGTT TTACAGGTTC
  K
  TATGCTACGC CAACAATATA AAAAAGTAGA ACAGGCTGAT ACGGGCTGTA CTAAGTCAGA
  GGTTTAATTT TTCCAGTTCT ATGATTAGAA CTATTTACT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss46475782	mCV24448790	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss325899162	CHEV_X_77166411	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs33868039					SNP	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:78964678 () rs orientation: forward

Symbol	Name	Function Class
Rr395274	regulatory region 395274	within coordinates