rs33870547 SNP Detail

Summary

• ID
  rs33870547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:153926635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTTCCAG CTTCTGGCTA
  TTATAAATAA GGCTGCTTTG AATATAGTGG AGCATGTGTT CTTATTACCA CTTGGAACAT
  CTTCTGGGTA CATGCCCAGG AGAGGTATTG CTGGATCTTC CAGTAAATGG ATCCCGGGGA
  TCCATCCCAT AATCAGCCAC CAAACCCAGA CACTATTGCA TATGCCAGCA AGATTTTGCT
  R
  AAGGGACCCT GGTAAAGCTG TCTTGTATGA GGCTATGCCA GTGCCTGGCA AATACAGAAG
  TGGATGCTCA CAGTTATCTA TAAGATGGAA AACAGGGGTG GGGTATGGGG GACTTTTGGG
  ATAGCATTGG AAATGTAAAT GAGGAAAATA CCTAATTAAA AAAATCATAT GAAGAATAAA
  AAAAATAAAG CACTGCACTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46486278	mCV23894526	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss134512371	ENSMUSSNP5698704	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33870547					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:153926635 () rs orientation: forward

Symbol	Name	Function Class
Rr3369	regulatory region 3369	966 bp proximal
Rr10542	regulatory region 10542	1118 bp proximal