rs33870548 SNP Detail

Summary

• ID
  rs33870548
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:52402562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCAATACAA TTCTCTGCAT TTACTGAAAT GTTATGAGAA
  TTTTTTTTTT GAGACAGAGT CTCACTGTGA GGCCTTGGCT AATTTGAAAG ACACAATGAT
  Y
  TGCGTACCTC TGCTTCCAGA GTCCTGGAAT TAAAGGTGTG TGCTGCCATG TTGGGCCCTA
  TGCTATTAGA ACTTGATACC AAACACTGAA AGAGAAGGG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss46486279	mCV22641452	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss134173795	ENSMUSSNP1629537	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs33870548					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:52402562 () rs orientation: forward

Symbol	Name	Function Class
Gm14585	predicted gene 14585	848 bp upstream
Pabir3	PABIR family member 3	within coordinates