rs33870648 SNP Detail

Summary

• ID
  rs33870648
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:80516930 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATAAAAGAGA TCTGATGATT GGGCAGATAA AAGGTAAGGT
  AGAGCAGAAG GTGGGGGAGA AGAAAGAGTA AATGGAAGAG GGAGAGGATG CAGAGGAGGA
  K
  AAAGAAGGAG AAAAGCGGAG CAGAAGCACA TGGCCTGGAG AAGCCGCAAG TTCTAGGGGT
  CTCATAAGCA ATGGAAGATG GTAGTGTAGT GGTAGATCT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46487700	mCV25317743	ABI	CRAMUS_MOUSE	f	SNP	T	T		T	G
ss134228567	ENSMUSSNP5391624	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G		G
ss325901780	CHEV_X_78718663	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33870648					SNP	T	T	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:80516930 () rs orientation: forward

Symbol	Name	Function Class
Rr7859	regulatory region 7859	499 bp distal