rs33876578 SNP Detail

Summary

• ID
  rs33876578
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:132894635 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGAAAGTGG CGGCACATAA CCAGTAATTC CAGAACTCAG
  GAAGTAAAGG CAAGAGGATC AGAAGTTTAA GTTCAGCTGC ATGGTGAGTT TGAGATCAGT
  Y
  GAAAGTCGAA ACTGCAAGAG ACTCTGCCTC AGGTGTGGGG GGGTGTAAAT ATAAGTTTCT
  GGGACTGTAT CATCATCTCT TTCAAAACTT TTACCACCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46506651	mCV25181976	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss134466865	ENSMUSSNP5227598	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33876578					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:132894635 () rs orientation: forward

Symbol	Name	Function Class
Rr6669	regulatory region 6669	1956 bp proximal